URI Astrobiology Team Publications
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2005
Refereed publicationsAmend, J. P., and A. Teske, 2005. Expanding frontiers in deep subsurface
microbiology. Palaeogeography, Palaeoclimatology, Palaeoecology, 219,
131-155. Dhillon, A., M. Lever, K.G. Lloyd,
D.B. Albert, M.L. Sogin, and A. Teske. Methanogen Diversity
Based on Molecular Characterization of Methyl Coenzyme M reductase A
(mcrA) Genes in Hydrothermal Sediments of the Guaymas Basin.
Applied and Environmental Microbiology, in press. Lloyd, K.G., V. P. Edgcomb, S.J. Molyneaux , C.O.
Wirsen, M. S. Atkins, and A. Teske, 2005. Effect of Dissolved Sulfide, pH, and Temperature on the Growth
and Survival of Marine Hyperthermophilic Archaea. Applied and Environmental
Microbiology, in press. Teske A., 2005. Microbial communities of deep marine subsurface sediments: Molecular and cultivation surveys. Geomicrobiology Journal, submitted. Teske, A., 2005. The deep subsurface biosphere
is alive and well. Trends in Microbiology, submitted. Special
Publications Teske,
A., 2005.
Microbial community composition in deep marine subsurface sediments
of ODP Leg 201: Sequencing surveys and cultivations. Leg 201 Scientific
Results, submitted. Non-refereed
articles Teske, A., and K. Edwards, 2005. The Deeps of Time in the Depths of the
Ocean. Oceanus. Website: http://oceanusmag.whoi.edu/v43n2. Abstracts Blair, C., S. D'Hondt, and A.J. Spivack, 2005. Assessment of radiolytic hydrogen as an energy source for life
in subseafloor sediments. NASA Astrobiology Institute Biennial Meeting
2005, Astrobiology, 5 (2), 250. D'Hondt, S., 2005. How
does life interact with its environment? NASA Astrobiology Institute
Biennial Meeting 2005, Astrobiology, 5 (2), 241. Fredricks, H.F., and K.-U.
Hinrichs, 2005. Probing subsurface life with intact membrane lipids. NASA Astrobiology
Institute Biennial Meeting 2005, Astrobiology, 5 (2), 284. Hinrichs, K.-U., J.M. Hayes, W. Bach, A.J. Spivack, L.R. Hmelo, N.G. Holm, and C.G. Johnson,
2005. Biological formation
of ethane and propane in the deep marine subsurface. NASA Astrobiology Institute Biennial Meeting 2005, Astrobiology,
5 (2), 296. Kallmeyer, J., S. D'Hondt, and A.J. Spivack, 2005. Separation of prokaryotic cells from deep sediments. NASA Astrobiology
Institute Biennial Meeting 2005, Astrobiology, 5 (2), 257. Lloyd, K.G., L. Lapham, and A. Teske, 2005. An anaerobic methane-oxidizing community
dominated by ANME-1 in a non-hydrate-associated Gulf of Mexico sediment.
NASA Astrobiology Institute Biennial Meeting 2005, Astrobiology, 5,
529. Lever, M., and A.
Teske, 2005. Deep marine subsurface communities
of the Peru Trench: sulfate reducers, methanogens, and unknowns. NASA
Astrobiology Institute Biennial Meeting 2005, Astrobiology, 5 (2), 259.
Pockalny, R.A., and S. D'Hondt, 2005. Adaptation of existing NSF-Funded REU Programs to include Astrobiology
undergraduate research. NASA Astrobiology Institute Biennial Meeting
2005, Astrobiology, 5 (2), 238. Riccardi, A., M.A. Arthur,
L.R. Kump and S. D'Hondt, 2005. Perturbations
to the chemocline of he ocean during the endo-permian mass extinction. NASA Astrobiology Institute Biennial Meeting
2005, Astrobiology, 5 (2), 293. Soffientino, B., A.J. Spivack, D.C. Smith, and S.L. D'Hondt, 2005. Hydrogenase activity as a proxy for hyrdogen metabolism in
deeply buried sediments and as a diagnostic test for life. NASA Astrobiology
Institute Biennial Meeting 2005, Astrobiology, 5 (2), 295. Teske, A., A. Lauer, and K. Sørensen, 2005. Phylogenetic profiles of Prokaryotic Communities in Deep Marine
Subsurface sediments (ODP Leg 201). ASLO Ocean Sciences Meeting 2005,
Santa Fe, New Mexico. Teske, A., A. Lauer, and K. Sørensen, 2005. Prokaryotes in Deep Marine Subsurface
Sediments: Phylogenetic Diversity of a Global Extreme Habitat. NASA Astrobiology Institute Biennial Meeting
2005, Astrobiology, 5 (2), 268. Twardowski,
M.S., C.B. Mouw, J. Dombroski, and D.C. Smith, 2005. Discriminating
organic chemical signatures in interstitial waters of deeply buried
sediments using flourescence spectroscopy. NASA Astrobiology Institute
Biennial Meeting 2005, Astrobiology, 5 (2), 298. Waldbauer, J.R., R. Buick,
J.M. Hayes,
and R.E. Summons, 2005. Molecular
biosignatures from the NAI archean biosphere drilling project. NASA
Astrobiology Institute Biennial Meeting 2005, Astrobiology, 5 (2), 277. Wang, G., A.J. Spivack, and S. D'Hondt, 2005. Co-occurrence of methanogenesis, sulfate reduction, and iron
reduction in deep-sea sediments. NASA Astrobiology Institute Biennial
Meeting 2005, Astrobiology, 5 (2), 272.
2004
Refereed Publications
Adams, J.B., M.E. Mann, and S. D'Hondt, 2004. The Cretaceous-Tertiary extinction: modeling carbon flux and ecological response.
Paleoceanography, 19(PA1002):
10.1029/2002PA000849.
D'Hondt, S,
B.B Jørgensen,
D.J. Miller, A. Batzke, R. Blake, B.A. Cragg, H. Cypionka, G.R. Dickens,
T. Ferdelman, K.-U. Hinrichs,
N.G. Holm, R. Mitterer, A. Spivack,
G. Wang, B.
Bekins, Bert Engelen, K. Ford, G. Gettemy, S.D. Rutherford, Henrik Sass, C.G. Skilbeck, I.W. Aiello,
G. Guérin, C. House, F. Inagaki, P. Meister, T. Nähr, S. Niitsuma,
R.J. Parkes, A. Schippers, D.C. Smith, A. Teske,
J. Wiegel, C. Naranjo Padilla, J.L. Solis Acosta, Distributions of microbial
activities in deep subseafloor sediments. Science, 306, 2216-2221.
Edgcomb, V.E.,
S.J. Molyneaux, M.A. Saito, K.G. Lloyd, S. Böer, C.O. Wirsen, M.S. Atkins,
and A. Teske,
2004. Sulfide ameliorates
metal toxicity in deep-sea hydrothermal vent archaea. Applied and Environmental Microbiology, 70, 2551-2555.
Hayes, J.M.,
2004. Isotopic order, biogeochemical
processes, and earth history [publication version of Goldschmidt Lecture,
2002]. Geochimica et Cosmochimica
Acta, 68, 1691-1700.
Orphan, V.J., W. Ussler,
III, T. Nähr, C.H. House, K.-U. Hinrichs, and C.K. Paull, 2004. Geological, geochemical, and microbiological heterogeneity of
the seafloor around methane vents in the Eel River Basin, offshore California.
Chemical Geology, 205, 265-289.
Sessions, A., S. Sylva, R. Summons, and J.M. Hayes,
2004. Isotopic exchange
of carbon-bound hydrogen over geologic timescales. Geochimica et Cosmochimica Acta, 68, 1545-1559. Sørensen,
K.B., A. Lauer,
and A. Teske,
2004. Archaeal phylotypes in a metal-rich, low-activity deep subsurface
sediment of the Peru Basin, ODP Leg 201, Site 1231. Geobiology, 2,151-161. Sturt,
H.F., R.E. Summons, K.J. Smith, M. Elvert, and K.-U. Hinrichs,
2004. Intact polar
membrane lipids in prokaryotes and sediments deciphered by ESI-HPLC-MSn
Ç new biomarkers for biogeochemistry and microbial ecology. Rapid Communications in Mass Spectrometry, 18, 617-628.
D'Hondt, S.,
A. Lauer, K.
Sørensen, A. Spivack, A. Teske, and G. Wang, 2004. Drilling for clues to extant life [Abstract]. AbSciCon 2004, NASA Ames Research Center,
Moffett Field, CA. International
Journal of Astrobiology, Supplement 1, 73.
Lauer, A. and
A. Teske, 2004.
Archaeal diversity in a deep-sea sediment of the equatorial Pacific
Ocean based on 16S rDNA analyses [Abstract].
ASLO/TOS 2004 Ocean Research Conference, Honolulu, Hawaii,
Abstract Book, p. 88.
Lauer,
A. and A. Teske,
2004. Uncultured archaea
in organic-poor subsurface sediments of the equatorial Pacific Ocean
(ODP Leg 201, Site 1225) [Abstract].
AbSciCon 2004, NASA Ames Research Center, Moffett Field, CA. International Journal of Astrobiology,
Supplement 1, 73.
Manor, U.,
S. Rutherford,
G. Wang, S. D'Hondt, and A.J. Spivack, 2004. An improved numerical
model for determining reaction rates in a subsurface biosphere [Abstract].
AbSciCon 2004, NASA Ames Research Center, Moffett Field, CA. International Journal of Astrobiology, Supplement 1, 73.
Soffientino,
B., A.J. Spivack, D.C.
Smith, and S.
D'Hondt, 2004. A method for estimating low levels of
hydrogen metabolosm in deeply buried sediments [Abstract]. AbSciCon 2004, NASA Ames Research
Center, Moffett Field, CA. International
Journal of Astrobiology, Supplement 1, 73.
Sørensen, K.B.
and A. Teske,
2004. Archaeal diversity
in a metal-rich, low-activity deep subsurface sediment of the Peru Basin
(ODP Leg 201, Site 1231) [Abstract].
ASLO/TOS 2004 Ocean Research Conference, Honolulu, Hawaii. Abstract Book, p. 88.
Sørensen, K.B.
and A. Teske,
2004. Archaeal phylotypes
in low activity deep subsurface sediments, ODP Leg 201, Site 1231 [Abstract]. AbSciCon 2004, NASA Ames Research Center,
Moffett Field, CA. International
Journal of Astrobiology, Supplement 1, 73.
Teske, A. ,
2004. Molecular puzzle: the deep marine subsurface biosphere.
[Invited Talk, 2004]. 104th
ASM General Meeting, New Orleans, LA.
Wang, G., A.J.
Spivack, S. D'Hondt, S.
Rutherford,
and U. Manor, 2004. Metabolic activity in deep-sea sediment columns [Abstract].
AbSciCon 2004, NASA Ames Research Center, Moffett Field, CA. International Journal of Astrobiology, Supplement 1, 73.
2003
Refereed Publications
Kormas, K.A., D.C. Smith, V.E. Edgcomb, and A. Teske, 2003. Molecular
analysis of deep subsurface microbial communities in Nankai Trough sediments
(ODP Leg 190, Site 1176A). FEMS Microbiology Ecology, 45, 115-125. Rothman, D.H., J.M. Hayes, and R.E. Summons, R.E., 2003. Dynamics
of the Neoproterozoic carbon cycle.
Proceedings of the National Academy of Sciences USA, 100, 8124-8129.
Teske, A., A. Dhillon, and M.L. Sogin, 2003. Genomic Markers of Ancient Anaerobic Microbial
Pathways: Sulfate reduction, Methanogenesis, and Methane Oxidation.
Biological Bulletin, 204, 186-191.
Special Publications
D'Hondt, S., B.B. Jørgensen,
D.J. Miller et al., 2003. Controls
on microbial communities in deeply buried sediments, eastern equatorial
Pacific and Peru Margin Sites 1225-123l.
Proc. ODP, Init. Repts.,
201 [CD-ROM]. Available
from Ocean Drilling Program, Texas A & M University, College Station
TX 77845-9547, USA. Website:
http://www-odp.tamu.edu/publications/201_IR/201ir.htm Dickens, G.R., D. Schroeder, K.-U. Hinrichs, and ODP Leg 201 Shipboard Scientific Party, 2003.
The pressure core sampler (PCS) on Ocean Drilling Program Leg
201: General operations and gas release.
Ocean Drilling Program Initial Report, Leg 201.
[CD-ROM], College Station, TX:
Ocean Drilling Program.
Website: http://www-odp.tamu.edu/publications/201_IR/chap_03/chap_03.htm Hayes, J.M.,
2003. Acceptance of the
2002 V. M. Goldschmidt Award.
Geochimica et Cosmochimica Acta, 6, 2303.
House, C., B. Cragg, and A. Teske, 2003. Drilling
Contamination Tests on ODP Leg 201 Using Chemical and Particulate Tracers.
Ocean Drilling Program Initial Report, Leg 201. [CD-ROM], College Station, TX: Ocean Drilling Program. Website: http://www-odp.tamu.edu/publications/201_IR/chap_02/chap_02.htm
Non-refereed
Articles
D'Hondt, S., Ocean-Drilling Exploration of Life Beneath the
Seafloor, 2003. Advance
in Earth Sciences [Chinese], 18 (5), 759-763. D'Hondt, S., B.B. Jørgensen,
D. Jay Miller, and the Leg 201 Scientific Party, 2003. ODP Leg 201 explores microbial life in
deeply buried marine sediments.
JOIDES Journal, 29 (1), 11-15.
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